Create aggregate thesis structure, initial import of papers

common-defs.tex

@@ -0,0 +1,135 @@
+\DeclareSIUnit{\baud}{Bd}
+
+\DeclarePairedDelimiter{\ceil}{\lceil}{\rceil}
+\DeclarePairedDelimiter{\paren}{(}{)}
+
+\usepackage[
+    backend=biber,
+    style=numeric,
+    natbib=true,
+    url=false, 
+    doi=true,
+    eprint=false,
+    refsection=chapter,
+    % Make the split online / other resource bibliographies behave
+    defernumbers=true,
+    ]{biblatex}
+\addbibresource{main.bib}
+\DeclareSourcemap{
+    \maps[datatype=bibtex]{
+        \map{
+            \step[fieldsource=doi,final]
+            \step[fieldset=isbn,null]
+            \step[fieldset=issn,null]
+            \step[fieldset=url,null]
+        }
+        \map{
+            \step[fieldsource=isbn,final]
+            \step[fieldset=issn,null]
+            \step[fieldset=url,null]
+        }
+    }
+}
+
+\renewcommand{\thesection}{\arabic{section}}
+\renewcommand{\thesubsection}{\arabic{section}.\arabic{subsection}}
+\renewcommand{\thesubsubsection}{\arabic{section}.\arabic{subsection}.\arabic{subsubsection}}
+
+% Re-define heading formats to force single line spacing
+\titleformat{\section}{\normalfont\large\bfseries\singlespacing}{\thesection}{1em}{}
+\titleformat{\subsection}{\normalfont\large\bfseries\singlespacing}{\thesubsection}{1em}{}
+\titleformat{\subsubsection}{\normalfont\large\bfseries\singlespacing}{\thesubsubsection}{1em}{}
+
+\dominitoc
+
+\newcommand{\degree}{\ensuremath{^\circ}}
+\newcolumntype{P}[1]{>{\centering\arraybackslash}p{#1}}
+\definecolor{todoboxcolor}{RGB}{251 224 252}
+
+\pagestyle{fancy}
+
+\fancyhead[C]{}
+\fancyhead[ER]{\footnotesize%
+    \ifdefined\thesispreviewmode %
+        (draft \texttt{\input{version.tex}\unskip}) %
+    \fi %
+\leftmark}
+\fancyhead[OL]{\footnotesize\rightmark}
+\fancyhead[EL,OR]{\thepage}
+
+\fancyfoot[LCR]{}
+
+\fancypagestyle{plain}{%
+    \fancyhf{}%
+    \renewcommand{\headrulewidth}{0pt}%
+    \renewcommand{\footrulewidth}{0pt}%
+}
+
+\raggedbottom
+
+\renewcommand{\chaptermark}[1]{\markboth{Chapter \thechapter: #1}{}}
+\renewcommand{\sectionmark}[1]{\markright{\thesection\ #1}}
+\addtolength{\headwidth}{\marginparsep}
+\addtolength{\headwidth}{\marginparwidth}
+\addtolength{\headwidth}{-1cm}
+
+\newcommand{\todo}[1]{
+    \ifdefined\thesispreviewmode
+    \marginpar{
+        \setlength{\fboxsep}{2mm}
+        \shadowbox{
+            \parbox{3cm}{
+                \singlespacing
+                \raggedright
+                \textsf{
+                    \small\textbf{To do}\\
+                    \footnotesize#1
+                }
+            }
+        }
+    }
+    \fi
+}
+
+\newcommand{\todoplaceholder}[1]{\textbf{TODO}\todo{#1}}
+
+% https://tex.stackexchange.com/questions/30720/footnote-without-a-marker
+\newcommand\blfootnote[1]{%
+  \begingroup
+  \renewcommand\thefootnote{}\footnote{#1}%
+  \addtocounter{footnote}{-1}%
+  \endgroup
+}
+
+\newcommand{\figureattrib}[1]{%
+    \input{\figurepath/#1.latex_meta} %
+    \scriptsize
+        \ifdefined\thesispreviewmode\resourcestate\ \resourcescale\\\fi%
+        Resource: %
+        \texttt{\resourcerepo/\resourcepath} %
+        rev \texttt{\resourcerev} %
+        (\underline{\href{\resourceurl}{link}})%
+}
+
+\newcommand{\draftgraphics}{\ifdefined\thesispreviewmode\textcolor{red}{\bfseries Not final graphics. }\fi}
+\newcommand{\camerareadygraphics}{\ifdefined\thesispreviewmode Camera-ready graphics. \fi}
+\newcommand{\scaledgraphics}[1]{\ifdefined\thesispreviewmode scaled-#1\else#1\fi}
+
+\newcolumntype{P}[1]{>{\centering\arraybackslash}p{#1}}
+\newcommand{\partno}[1]{\textsf{\small#1}}
+\newcommand{\price}[2]{#1 #2}
+
+\newcommand{\imgsource}[4]{\scriptsize%
+    Image source: #1, #2 (\underline{\href{#4}{link}}). %
+    Licensed #3.}
+
+\newcommand{\chapterbibliography}{
+    \clearpage % clearpage flushes all figures. force this here so we don't get figures floating in between references.
+    \newrefcontext[labelprefix={W}]
+    \printbibliography[type={online},title={Web sources},heading=subbibintoc]
+    \newrefcontext
+    \printbibliography[nottype={online},resetnumbers,heading=subbibintoc]
+}
+
+\hyphenation{a-me-na-ble}
+